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GroupDocs.Comparison provides different ways of saving output document -  save with password, select document metadata source etc.

The SaveOptions class provides the following properties to customize saving process:

• CloneMetadataType gets or sets a value indicating whether to clone metadata to target document or not
• FileAuthorMetadata allows set metadata values provided by user
• Password gets or sets the password for result document

For details, see the following guides:

• Set document metadata on save
• Set password for output document
• Save comparison result in different format